Documentation

To get started, see the quick start tutorial. Then, view the documentation below.

MACH2 Documentation

• Input Files
• Command Line Usage
• Python API Usage
  • MACH
  • MigrationGraph
  • Phylogeny
  • RefinedPhylogeny
  • SolutionSet
  • Solution

MACH2-Viz Documentation

• Getting Started
• Data Preparation
• Navigating the Visualizer
• Comparing Solutions
• Summary View